Structure of PDB 7syi Chain C Binding Site BS02

Receptor Information
>7syi Chain C (length=213) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS
LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM
IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMME
IMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKK
PKFELGKLMELHG
Ligand information
>7syi Chain z (length=162) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cccccccucccgggagagccauaguggucugcggaaccggugaguacacc
ggaaugauuugggcgugcccccgcaagacugcuagccgaguaguguuggg
ucgcgaaaggccuugugguacugccugauagggugcuugcgagugccccg
ggaggucucgua
.....<<<<<<<<<<<.<<<<<<<<<<<<<<<<<..<<<<<<....>>>>
>><<...>>.<<<<..>>>>>>>>.>>>>>>>>><<<.....<<......
..>>....>>>....>>>>.>><<<......>>><<...((((.>>>>>>
>>>>>.))))..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7syi Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
Resolution4.5 Å
Binding residue
(original residue number in PDB)		K199 S203
Binding residue
(residue number reindexed from 1)		K179 S183
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0030154 cell differentiation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7syi, PDBe:7syi, PDBj:7syi
PDBsum7syi
PubMed35822879
UniProtG1SS70|RS3A_RABIT Small ribosomal subunit protein eS1 (Gene Name=RPS3A)

[Back to BioLiP]