Structure of PDB 7ovs Chain C Binding Site BS02

Receptor Information
>7ovs Chain C (length=379) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PRIMRLVAECSRSGARAGELRLPHGTVATPVFMPVGTQATMKGITTEQLD
SLGCRICLGNTYHLGLRPGPELIRKAQGLHGFMNWPHNLLTDSGGFLSEV
TEEGVHFRSPYDGEETLLSPERSVEIQNALGSDIIMQLDHVVSTGPLVEE
AMHRSVRWLDRCIAAHKHPDKQNLFAIIQGGLNADLRTTCLKEMTKRDVP
GFAIGGLSGGESKAQFWKMVALSTSMLPKDKPRYLMGVGYATDLVVCVAL
GCDMFDCVYPTRTARFGSALVPTGNLQLKKKQYAKDFSPINPECPCPTCQ
THSRAFLHALLHSDNTTALHHLTVHNIAYQLQLLSAVRSSILEQRFPDFV
RNFMRTMYGDHSLCPAWAVEALASVGIML
Ligand information
Ligand ID2I2
InChIInChI=1S/2HO4P.10H2O.5O.5W/c2*1-5(2,3)4;;;;;;;;;;;;;;;;;;;;/h2*(H,1,2);10*1H2;;;;;;;;;;/q2*+2;;;;;;;;;;;;;;;;3*+2;2*+3/p-12
InChIKeyYRVJCESOOVOMAC-UHFFFAOYSA-B
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7O[W]123(OP4(=O)[O+]5[W]6(O1)(OP7(=O)[O+]2[W]8(O3)([O+]4[W]9(O8)([O+]7[W]5(O6)(O9)(O)O)(O)O)(O)O)(O)O)O
CACTVS 3.385O[W]123(O)O[P]4(=O)[O+]5[W]6(O)(O)(O[P]7(=O)[O+]1[W]8(O)(O)(O2)O[W]9(O)(O)(O[W]5(O)(O)(O6)[O+]79)[O+]48)O3
OpenEye OEToolkits 2.0.7O[W]123(O[P@@]4(=O)[O+]5[W]6(O1)(O[P@@]7(=O)[O+]2[W]8(O3)([O+]4[W]9(O8)([O+]7[W]5(O6)(O9)(O)O)(O)O)(O)O)(O)O)O
CACTVS 3.385O[W]123(O)O[P@@]4(=O)[O+]5[W]6(O)(O)(O[P@@]7(=O)[O+]1[W]8(O)(O)(O2)O[W]9(O)(O)(O[W]5(O)(O)(O6)[O+]79)[O+]48)O3
FormulaH10 O23 P2 W5
Namepentadecaoxodiphosphopentatungstate
ChEMBL
DrugBank
ZINC
PDB chain7ovs Chain C Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7ovs Structural and Biochemical Investigation of the Heterodimeric Murine tRNA-Guanine Transglycosylase.
Resolution2.6 Å
Binding residue
(original residue number in PDB)		K236 A389 W390
Binding residue
(residue number reindexed from 1)		K213 A366 W367
Annotation score1
Enzymatic activity
Enzyme Commision number 2.4.2.64: tRNA-guanosine(34) queuine transglycosylase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0008479 tRNA-guanosine(34) queuine transglycosylase activity
GO:0016757 glycosyltransferase activity
GO:0016763 pentosyltransferase activity
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006400 tRNA modification
GO:0008033 tRNA processing
GO:0101030 tRNA-guanine transglycosylation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005741 mitochondrial outer membrane
GO:0032473 cytoplasmic side of mitochondrial outer membrane
GO:0032991 protein-containing complex
GO:0120507 tRNA-guanine transglycosylase complex
GO:1990234 transferase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ovs, PDBe:7ovs, PDBj:7ovs
PDBsum7ovs
PubMed35815944
UniProtQ9JMA2|TGT_MOUSE Queuine tRNA-ribosyltransferase catalytic subunit 1 (Gene Name=Qtrt1)

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