Structure of PDB 7m1x Chain C Binding Site BS02
Receptor Information
>7m1x Chain C (length=103) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV
LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHK
SLI
Ligand information
>7m1x Chain J (length=136) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cggtgccgaggccgctcaattggtcgtagacagctctagcaccgcttaaa
cgcacgtacgcgctgtcccccgcgttttaaccgccaaggggattactccc
tagtctccaggcacgtgtcagatatatacatcctgt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7m1x
Structural basis of chromatin regulation by histone variant H2A.Z.
Resolution
3.7 Å
Binding residue
(original residue number in PDB)
R831 K837 R845 V846 G847 A848 V878 K879 R880
Binding residue
(residue number reindexed from 1)
R16 K22 R30 V31 G32 A33 V63 K64 R65
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000978
RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000979
RNA polymerase II core promoter sequence-specific DNA binding
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0031490
chromatin DNA binding
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006325
chromatin organization
GO:0045944
positive regulation of transcription by RNA polymerase II
GO:0071392
cellular response to estradiol stimulus
Cellular Component
GO:0000786
nucleosome
GO:0000791
euchromatin
GO:0000792
heterochromatin
GO:0001740
Barr body
GO:0005634
nucleus
GO:0005694
chromosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7m1x
,
PDBe:7m1x
,
PDBj:7m1x
PDBsum
7m1x
PubMed
34643712
UniProt
P0C0S6
|H2AZ_MOUSE Histone H2A.Z (Gene Name=H2az1)
[
Back to BioLiP
]