Structure of PDB 6zmc Chain C Binding Site BS02

Receptor Information
>6zmc Chain C (length=200) Species: 160488 (Pseudomonas putida KT2440) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SLIPEIDAFLGCPTPDAWIEAALADQETLLIDHKNCEFKAASTALSLIAK
YNTHLDLINMMSRLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRR
LVRAHEPVKLVDTLVVGAFIEARSCERFAALVPHLDEELGRFYHGLLKSE
ARHYQGYLKLAHNYGDEADIARRVELVRAAEMELIQSPDQELRFHSGIPQ
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain6zmc Chain C Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6zmc Structural, biochemical and functional analyses of tRNA-monooxygenase enzyme MiaE from Pseudomonas putida provide insights into tRNA/MiaE interaction.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		E69 E122 E151 H154
Binding residue
(residue number reindexed from 1)		E68 E121 E150 H153
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006400 tRNA modification

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6zmc, PDBe:6zmc, PDBj:6zmc
PDBsum6zmc
PubMed32785618
UniProtA0A179QS89

[Back to BioLiP]