Structure of PDB 6xqi Chain C Binding Site BS02
Receptor Information
>6xqi Chain C (length=63) Species:
11698
(Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NEWTLELLEELKSEAVRHFPRIWLHNLGQHIYETYGDTWAGVEAIIRILQ
QLLFIHFRIGCSH
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
6xqi Chain C Residue 101 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6xqi
Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A.
Resolution
2.34 Å
Binding residue
(original residue number in PDB)
H33 H71 C76 H78
Binding residue
(residue number reindexed from 1)
H18 H56 C61 H63
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0019058
viral life cycle
Cellular Component
GO:0042025
host cell nucleus
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6xqi
,
PDBe:6xqi
,
PDBj:6xqi
PDBsum
6xqi
PubMed
34824204
UniProt
P12520
|VPR_HV1N5 Protein Vpr (Gene Name=vpr)
[
Back to BioLiP
]