Structure of PDB 6x0i Chain C Binding Site BS02
Receptor Information
>6x0i Chain C (length=443) Species:
330879
(Aspergillus fumigatus Af293) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RLRSTPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKQPKICFLERQK
QFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFTFLNYLHQKGRLIHFTN
LSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFF
TVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTL
PALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAMRPS
DDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIY
NDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPKET
LEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKV
SSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMVQSIFGEQLE
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
6x0i Chain C Residue 603 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6x0i
Trapping conformational states of a flavin-dependent N -monooxygenase in crystallo reveals protein and flavin dynamics.
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
K100 Q102 P217 S254 G255 Q256 S257 E260 R279 N323 Y324 S325 A404 T405
Binding residue
(residue number reindexed from 1)
K64 Q66 P181 S218 G219 Q220 S221 E224 R243 N287 Y288 S289 A359 T360
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.14.13.196
: L-ornithine N(5)-monooxygenase [NAD(P)H].
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0004497
monooxygenase activity
GO:0004499
N,N-dimethylaniline monooxygenase activity
GO:0005506
iron ion binding
GO:0031172
ornithine N5-monooxygenase activity
GO:0070401
NADP+ binding
Biological Process
GO:0006696
ergosterol biosynthetic process
GO:0006879
intracellular iron ion homeostasis
GO:0009058
biosynthetic process
GO:0010106
cellular response to iron ion starvation
GO:0019290
siderophore biosynthetic process
GO:0031169
ferrichrome biosynthetic process
GO:0033214
siderophore-dependent iron import into cell
GO:0044550
secondary metabolite biosynthetic process
Cellular Component
GO:0005575
cellular_component
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6x0i
,
PDBe:6x0i
,
PDBj:6x0i
PDBsum
6x0i
PubMed
32723870
UniProt
E9QYP0
|SIDA_ASPFU L-ornithine N(5)-monooxygenase (Gene Name=sidA)
[
Back to BioLiP
]