Structure of PDB 6pun Chain C Binding Site BS02

Receptor Information
>6pun Chain C (length=388) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLPTWSLDSNGEMRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLT
SYQKFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVIGISLATNDDGYTKRQ
EKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLI
AICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDKYGCRVV
QTIIEKLTALTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHIV
SNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMM
DEIFDGYIPHPDTGKDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKE
GAISFQDWLKKLHSRVTKERHRLSRFSSGKKMIETLAN
Ligand information
>6pun Chain F (length=16) Species: 6239 (Caenorhabditis elegans) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
GLRSQKLHLTYIEKNK
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6pun A crystal structure of a collaborative RNA regulatory complex reveals mechanisms to refine target specificity.
Resolution2.099 Å
Binding residue
(original residue number in PDB)
R441 S445 Q448 E449 E474 G478 Y479 I480 D488 I492 F495 H496 Q497 F552
Binding residue
(residue number reindexed from 1)
R269 S273 Q276 E277 E302 G306 Y307 I308 D316 I320 F323 H324 Q325 F376
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:6pun, PDBe:6pun, PDBj:6pun
PDBsum6pun
PubMed31397673
UniProtQ09312|FBF2_CAEEL Fem-3 mRNA-binding factor 2 (Gene Name=fbf-2)

[Back to BioLiP]