Structure of PDB 6p7e Chain C Binding Site BS02

Receptor Information
>6p7e Chain C (length=672) Species: 10760 (Escherichia phage T7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIVSAIAANALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEV
ARGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHS
NLKDTDMGLLRSGKLPGKRFGSHALEAWGYRLGEMKGEYKDDFKRMLEEQ
GEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPEIDFTD
VGYTTFWSESLEAVDIEHRAAWLLAKQERNGFPFDTKAIEELYVELAARR
SELLRKLTETFGSWYQPKGGTEMFCHPRTGKPLPKYPRDTREYVAGAPYT
PVEHVVFNPSSRDHIQKKLQEAGWVPTKYTDKGAPVVDDEVLEGVRVDDP
EKQAAIDLIKEYLMIQKRIGQSAEGDKAWLRYVAEDGKIHGSVNPNGAVT
GRATHAFPNLAQIPGVRSPYGEQCRAAFGAEHHLDGITGKPWVQAGIDAS
GLELRCLAHFMARFDNGEYAHEILNGDIHTKNQIAAELPTRDNAKTFIYG
FLYGAGDEKIGQIVGAGKERGKELKKKFLENTPAIAALRESIQQTLVESS
QWQVKWKRRWIKGLDGRKVHVRSPHAALNTLLQSAGALICKLWIIKTEEM
LVEKGLKHGWDGDFAYMAWVHDEIQVGCRTEEIAQVVIETAQEAMRWVGD
HWNFRCLLDTEGKMGPNWAICH
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6p7e Combined Solution and Crystal Methods Reveal the Electrostatic Tethers That Provide a Flexible Platform for Replication Activities in the Bacteriophage T7 Replisome.
Resolution3.001 Å
Binding residue
(original residue number in PDB)		R318 S337 S338 G402 K404 T431 H432 A433 Q439 Y526 G527 Y530 A532 G533 K536 W579 R604 H607 N611 Q615
Binding residue
(residue number reindexed from 1)		R291 S310 S311 G375 K377 T404 H405 A406 Q412 Y499 G500 Y503 A505 G506 K509 W552 R572 H575 N579 Q583
Enzymatic activity
Enzyme Commision number 2.7.7.7: DNA-directed DNA polymerase.
3.1.11.-
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0004527 exonuclease activity
GO:0004529 DNA exonuclease activity
GO:0005515 protein binding
GO:0008408 3'-5' exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006261 DNA-templated DNA replication
GO:0006302 double-strand break repair
GO:0039693 viral DNA genome replication
GO:0090592 DNA synthesis involved in DNA replication

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6p7e, PDBe:6p7e, PDBj:6p7e
PDBsum6p7e
PubMed31659895
UniProtP00581|DPOL_BPT7 DNA-directed DNA polymerase (Gene Name=5)

[Back to BioLiP]