Structure of PDB 6ofu Chain C Binding Site BS02

Receptor Information

>6ofu Chain C (length=262) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGT
GFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSL
MRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALYTD
PDQAAEFVERTGCDSLAVAILNFEVVKRVRDAVSVPLVLHGASGISDADI
KTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALE
KIKLFGSDGKAE

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

6ofu Chain C Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6ofu Structural and Functional Characterization of YdjI, an Aldolase of Unknown Specificity inEscherichia coliK12.
Resolution	1.75 Å
Binding residue (original residue number in PDB)	H82 E133 H206
Binding residue (residue number reindexed from 1)	H82 E133 H190
Annotation score	1

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0008270	zinc ion binding
GO:0009025	tagatose-bisphosphate aldolase activity
GO:0016832	aldehyde-lyase activity
GO:0042802	identical protein binding

	Biological Process
GO:0005975	carbohydrate metabolic process
GO:0051289	protein homotetramerization

	Cellular Component
GO:0005829	cytosol

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Cellular Component

External links

PDB	RCSB:6ofu, PDBe:6ofu, PDBj:6ofu
PDBsum	6ofu
PubMed	31322866
UniProt	P77704\|YDJI_ECOLI Uncharacterized protein YdjI (Gene Name=ydjI)

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