Structure of PDB 6lod Chain C Binding Site BS02

Receptor Information
>6lod Chain C (length=456) Species: 383372 (Roseiflexus castenholzii DSM 13941) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SAYGKMLEELLGPKQTYESVTRTIGDIVLTPIRKTPWGWPVGFVIAALGL
LMYLFSLAVLFTVGVGVWGINIPVAWGFDIINFVWWIGIGHAGTLISAIL
LLFRQDWRTSINRAAEAMTIFAVACAGIYPLVHTGRPWLDYWMLPYPGTL
GMWPQFRSALEWDVFAISTYATVSILFWYLGLIPDLASLRDRATNIWVKR
FYGFLALGWRGGARDWNRYEVASLILAGLSTPLVLSVHSIISLDFAISQL
PGWHVTVFPPYFVAGAVYCGFAMVILLLVPLRRWYKLHDLITIKHFDLMG
KVMLASGLVVAYGYFAEIFYAWYSANIYEYFLITNRTMGPYAWSYWALIV
LNVAIPQLLWFKRFRVSLPWLFFISICINIGMWFERWVIIVLSLHRDFLP
SSWGYYTPSVWDISLYAGSFGWFFFLFFLFIRLLPAISIFEVRDLVHKTE
TEKALA
Ligand information
Ligand IDEL6
InChIInChI=1S/C39H76O4/c1-4-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-38(40)42-36-37(3)43-39(41)35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-5-2/h37H,4-36H2,1-3H3/t37-/m0/s1
InChIKeyJEMDXOYRWHZUCG-QNGWXLTQSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCCCC(=O)OCC(C)OC(=O)CCCCCCCCCCCCCCCCC
CACTVS 3.385
OpenEye OEToolkits 2.0.7		CCCCCCCCCCCCCCCCCC(=O)OC[C@H](C)OC(=O)CCCCCCCCCCCCCCCCC
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)OC[CH](C)OC(=O)CCCCCCCCCCCCCCCCC
FormulaC39 H76 O4
Name[(2S)-2-octadecanoyloxypropyl] octadecanoate
ChEMBL
DrugBank
ZINCZINC000101683508
PDB chain6lod Chain B Residue 1102 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6lod Cryo-EM structures of the air-oxidized and dithionite-reduced photosynthetic alternative complex III from Roseiflexus castenholzii .
Resolution3.2 Å
Binding residue
(original residue number in PDB)		F69 P145 W146
Binding residue
(residue number reindexed from 1)		F61 P137 W138
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Cellular Component
External links
PDB RCSB:6lod, PDBe:6lod, PDBj:6lod
PDBsum6lod
PubMed32832681
UniProtA7NJ89

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