Structure of PDB 6hgq Chain C Binding Site BS02
Receptor Information
>6hgq Chain C (length=179) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLK
ATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASY
SLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVL
ECVSLVELTSLKGREKLAPVPFFSLLQYE
Ligand information
Ligand ID
HPA
InChI
InChI=1S/C5H4N4O/c10-5-3-4(7-1-6-3)8-2-9-5/h1-2H,(H2,6,7,8,9,10)
InChIKey
FDGQSTZJBFJUBT-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C1c2c(N=CN1)ncn2
OpenEye OEToolkits 1.5.0
c1[nH]c2c(n1)N=CNC2=O
CACTVS 3.341
O=C1NC=Nc2nc[nH]c12
Formula
C5 H4 N4 O
Name
HYPOXANTHINE
ChEMBL
CHEMBL1427
DrugBank
DB04076
ZINC
ZINC000018153302
PDB chain
6hgq Chain C Residue 202 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6hgq
Structural basis for substrate selectivity and nucleophilic substitution mechanisms in human adenine phosphoribosyltransferase catalyzed reaction.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
F26 R27 R67 E104 Y105 L129
Binding residue
(residue number reindexed from 1)
F25 R26 R66 E103 Y104 L128
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.4.2.7
: adenine phosphoribosyltransferase.
Gene Ontology
Molecular Function
GO:0002055
adenine binding
GO:0003999
adenine phosphoribosyltransferase activity
GO:0005515
protein binding
GO:0016208
AMP binding
GO:0016757
glycosyltransferase activity
Biological Process
GO:0006166
purine ribonucleoside salvage
GO:0006168
adenine salvage
GO:0007625
grooming behavior
GO:0032263
GMP salvage
GO:0032264
IMP salvage
GO:0044209
AMP salvage
GO:0046083
adenine metabolic process
Cellular Component
GO:0005576
extracellular region
GO:0005654
nucleoplasm
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0034774
secretory granule lumen
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6hgq
,
PDBe:6hgq
,
PDBj:6hgq
PDBsum
6hgq
PubMed
31160323
UniProt
P07741
|APT_HUMAN Adenine phosphoribosyltransferase (Gene Name=APRT)
[
Back to BioLiP
]