Structure of PDB 6dka Chain C Binding Site BS02

Receptor Information
>6dka Chain C (length=230) Species: 307796 (Saccharomyces cerevisiae YJM789) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPEFMSQYGFVRVPREVEKAIPVVNAPRPRAVVPPPNSETARLVREYAAK
ELTAPVLNHSLRVFQYSVAIIRDQFPAWDLDQEVLYVTCLLHDIATTDKN
MRATKMSFEYYGGILSRELVFNATGGNQDYADAVTEAIIRHQDLTGTGYI
TTLGLILQIAVTLDNVGSNTDLIHIDTVSAINEQFPRLHWLSCFATVVDT
ENSRKPWGHTSSLGDDFSKKVICNTFGYTK
Ligand information
Ligand IDCNN
InChIInChI=1S/CH2N2/c2-1-3/h2H2
InChIKeyXZMCDFZZKTWFGF-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NC#N
OpenEye OEToolkits 1.5.0C(#N)N
ACDLabs 10.04N#CN
FormulaC H2 N2
NameCYANAMIDE
ChEMBLCHEMBL56279
DrugBankDB02679
ZINC
PDB chain6dka Chain C Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6dka Structure of Ddi2, a highly inducible detoxifying metalloenzyme fromSaccharomyces cerevisiae.
Resolution2.901 Å
Binding residue
(original residue number in PDB)		D89 F104 H137 V157 F190
Binding residue
(residue number reindexed from 1)		D93 F108 H141 V161 F194
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6dka, PDBe:6dka, PDBj:6dka
PDBsum6dka
PubMed31152065
UniProtA7A1Y4

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