Structure of PDB 6c98 Chain C Binding Site BS02
Receptor Information
>6c98 Chain C (length=262) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPCGAWVW
ENQVSWYWEKETTDLRIKEKLFLEAFKALGGPYTLQGLLGCELGPDNTSV
PTAKFALNGEEFMNFDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFL
LFSCPHRLREHLERGRGNLEWKEPPSMRLKARPSSPGFSVLTCSAFSFYP
PELQLRFLRNGLAAGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYCCIVQ
HAGLAQPLRVEL
Ligand information
Ligand ID
ER7
InChI
InChI=1S/C14H11FN4O/c1-8-12(9(2)20)13(10-4-3-5-11(15)6-10)19-14(18-8)16-7-17-19/h3-7H,1-2H3
InChIKey
VMZVIJOZARWDNG-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
Cc1c(c(n2c(n1)ncn2)c3cccc(c3)F)C(=O)C
ACDLabs 12.01
n1c3n(nc1)c(c2cc(ccc2)F)c(c(C)n3)C(C)=O
CACTVS 3.385
CC(=O)c1c(C)nc2ncnn2c1c3cccc(F)c3
Formula
C14 H11 F N4 O
Name
1-[7-(3-fluorophenyl)-5-methyl[1,2,4]triazolo[1,5-a]pyrimidin-6-yl]ethan-1-one
ChEMBL
DrugBank
ZINC
PDB chain
6c98 Chain D Residue 101 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6c98
Insight into small molecule binding to the neonatal Fc receptor by X-ray crystallography and 100 kHz magic-angle-spinning NMR.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
W29 Q34 S230 G232
Binding residue
(residue number reindexed from 1)
W26 Q31 S225 G227
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6c98
,
PDBe:6c98
,
PDBj:6c98
PDBsum
6c98
PubMed
29782488
UniProt
P55899
|FCGRN_HUMAN IgG receptor FcRn large subunit p51 (Gene Name=FCGRT)
[
Back to BioLiP
]