Structure of PDB 5yzz Chain C Binding Site BS02
Receptor Information
>5yzz Chain C (length=111) Species:
3702
(Arabidopsis thaliana) [
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LNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQD
VRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGG
KLIMGSRKAAN
Ligand information
>5yzz Chain B (length=13) [
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tatccatgcagaa
Receptor-Ligand Complex Structure
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PDB
5yzz
Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Resolution
2.58 Å
Binding residue
(original residue number in PDB)
K297 S300 A301 S302 V311 P313 K314 N351 M356
Binding residue
(residue number reindexed from 1)
K11 S14 A15 S16 V25 P27 K28 N65 M70
Binding affinity
PDBbind-CN
: Kd=6.13uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
View graph for
Molecular Function
External links
PDB
RCSB:5yzz
,
PDBe:5yzz
,
PDBj:5yzz
PDBsum
5yzz
PubMed
29733847
UniProt
Q8W4L5
|VAL1_ARATH B3 domain-containing transcription repressor VAL1 (Gene Name=VAL1)
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