Structure of PDB 5ypw Chain C Binding Site BS02
Receptor Information
>5ypw Chain C (length=90) Species:
83334
(Escherichia coli O157:H7) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLV
NDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ
Ligand information
Ligand ID
VAL
InChI
InChI=1S/C5H11NO2/c1-3(2)4(6)5(7)8/h3-4H,6H2,1-2H3,(H,7,8)/t4-/m0/s1
InChIKey
KZSNJWFQEVHDMF-BYPYZUCNSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(N)C(C)C
OpenEye OEToolkits 1.5.0
CC(C)C(C(=O)O)N
OpenEye OEToolkits 1.5.0
CC(C)[C@@H](C(=O)O)N
CACTVS 3.341
CC(C)[C@H](N)C(O)=O
CACTVS 3.341
CC(C)[CH](N)C(O)=O
Formula
C5 H11 N O2
Name
VALINE
ChEMBL
CHEMBL43068
DrugBank
DB00161
ZINC
ZINC000000895099
PDB chain
5ypw Chain C Residue 102 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5ypw
Crystallographic Structures of IlvN·Val/Ile Complexes: Conformational Selectivity for Feedback Inhibition of Aceto Hydroxy Acid Synthases.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
N37 V38
Binding residue
(residue number reindexed from 1)
N29 V30
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.2.1.6
: acetolactate synthase.
Gene Ontology
Molecular Function
GO:0003984
acetolactate synthase activity
GO:0005515
protein binding
GO:0016740
transferase activity
GO:1990610
acetolactate synthase regulator activity
Biological Process
GO:0008652
amino acid biosynthetic process
GO:0009082
branched-chain amino acid biosynthetic process
GO:0009097
isoleucine biosynthetic process
GO:0009099
L-valine biosynthetic process
Cellular Component
GO:0005829
cytosol
GO:0005948
acetolactate synthase complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5ypw
,
PDBe:5ypw
,
PDBj:5ypw
PDBsum
5ypw
PubMed
30887800
UniProt
P0ADF8
|ILVN_ECOLI Acetolactate synthase isozyme 1 small subunit (Gene Name=ilvN)
[
Back to BioLiP
]