Structure of PDB 5wmt Chain C Binding Site BS02
Receptor Information
>5wmt Chain C (length=212) Species:
9615
(Canis lupus familiaris) [
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EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDE
NALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSE
FGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVI
ADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWS
SKTTVWDWELMN
Ligand information
Ligand ID
9QY
InChI
InChI=1S/C20H19ClN2O4/c1-27-20(26)18-14(19(21)16(25)11-15(18)24)7-8-17-22-9-10-23(17)12-13-5-3-2-4-6-13/h2-6,9-11,24-25H,7-8,12H2,1H3
InChIKey
NCWIQXPFJORNJP-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
COC(=O)c1c(cc(c(c1CCc2nccn2Cc3ccccc3)Cl)O)O
CACTVS 3.385
COC(=O)c1c(O)cc(O)c(Cl)c1CCc2nccn2Cc3ccccc3
ACDLabs 12.01
COC(=O)c3c(cc(c(c3CCc2nccn2Cc1ccccc1)Cl)O)O
Formula
C20 H19 Cl N2 O4
Name
methyl 2-[2-(1-benzyl-1H-imidazol-2-yl)ethyl]-3-chloro-4,6-dihydroxybenzoate;
resorcinylic inhibitor BnIm
ChEMBL
CHEMBL3426787
DrugBank
ZINC
ZINC000201654561
PDB chain
5wmt Chain C Residue 406 [
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Receptor-Ligand Complex Structure
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PDB
5wmt
Structure Based Design of a Grp94-Selective Inhibitor: Exploiting a Key Residue in Grp94 To Optimize Paralog-Selective Binding.
Resolution
2.748 Å
Binding residue
(original residue number in PDB)
D149 M154 N162 L163 F195 W223 I247
Binding residue
(residue number reindexed from 1)
D76 M81 N89 L90 F112 W140 I164
Annotation score
1
Binding affinity
BindingDB: Ki=440nM,IC50=1100nM,Kd=1380nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0051082
unfolded protein binding
GO:0140662
ATP-dependent protein folding chaperone
Biological Process
GO:0006457
protein folding
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:5wmt
,
PDBe:5wmt
,
PDBj:5wmt
PDBsum
5wmt
PubMed
29528635
UniProt
P41148
|ENPL_CANLF Endoplasmin (Gene Name=HSP90B1)
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