Structure of PDB 5paa Chain C Binding Site BS02

Receptor Information
>5paa Chain C (length=250) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWR
NLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPV
VLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNV
PRLMTQDCLQQSRSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTW
YLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSEPRPGVLLRAPFP
Ligand information
Ligand IDAMC
InChIInChI=1S/C7H15N/c8-6-7-4-2-1-3-5-7/h7H,1-6,8H2/p+1
InChIKeyAVKNGPAMCBSNSO-UHFFFAOYSA-O
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C1CCC(CC1)C[NH3+]
ACDLabs 10.04
CACTVS 3.341		[NH3+]CC1CCCCC1
FormulaC7 H16 N
NameAMINOMETHYLCYCLOHEXANE
ChEMBL
DrugBankDB02435
ZINC
PDB chain5paa Chain C Residue 506 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5paa Crystal Structure of a Factor VIIa complex
Resolution1.98 Å
Binding residue
(original residue number in PDB)		D398 S399 C400 S404 V422 G427
Binding residue
(residue number reindexed from 1)		D182 S183 C184 S188 V206 G211
Annotation score1
Enzymatic activity
Enzyme Commision number 3.4.21.21: coagulation factor VIIa.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5paa, PDBe:5paa, PDBj:5paa
PDBsum5paa
PubMed
UniProtP08709|FA7_HUMAN Coagulation factor VII (Gene Name=F7)

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