Structure of PDB 5lak Chain C Binding Site BS02
Receptor Information
>5lak Chain C (length=303) Species:
1041929
(Cavally virus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SAASNPSISHIVLEMPVAINPLIKYTTRTSVSSLRGAVVNGYIYIQRHLF
GSKKQEFEACYNNGKGLLNCKNLERSKYDIDSAELIGTLIRIPLHDKHSI
PHISIHPDPLSYNGPVTLYLSRYDTNKDVLCVHTGFMSEGHHDIKTVFGD
CGGMLFDPKGRLLGLHCAGSDDVVFMDTTTGKSNIWTSYKLQHPSEIMIT
LNNEINLPNPANYDFETTKVVYQHPLRNVCATLETLQHLTNKTNAKLPYD
SRLLSDFNITAEQYNQYGYYIDYNNFVNNFNRYTTTTIGTKSFETCIKYG
LMD
Ligand information
>5lak Chain J (length=5) Species:
32630
(synthetic construct) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cYYNQ
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5lak
Structural basis for catalysis and substrate specificity of a 3C-like cysteine protease from a mosquito mesonivirus.
Resolution
2.299 Å
Binding residue
(original residue number in PDB)
H48 T148 F150 G151 C153 H168 C169 A170 G171 S172 D173 Y215 D216 E218 T219 T220 K221
Binding residue
(residue number reindexed from 1)
H48 T146 F148 G149 C151 H166 C167 A168 G169 S170 D171 Y213 D214 E216 T217 T218 K219
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004197
cysteine-type endopeptidase activity
View graph for
Molecular Function
External links
PDB
RCSB:5lak
,
PDBe:5lak
,
PDBj:5lak
PDBsum
5lak
PubMed
31078932
UniProt
F8RL29
|R1AB_AMV79 Replicase polyprotein 1ab (Gene Name=pp1ab)
[
Back to BioLiP
]