Structure of PDB 5cib Chain C Binding Site BS02
Receptor Information
>5cib Chain C (length=294) Species:
559292
(Saccharomyces cerevisiae S288C) [
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TTPLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLA
WHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFP
WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKD
AGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTN
EFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKE
YANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
Ligand information
Ligand ID
51S
InChI
InChI=1S/C8H11N/c1-6-3-4-8(9)7(2)5-6/h3-5H,9H2,1-2H3
InChIKey
CZZZABOKJQXEBO-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
c1(cc(C)c(cc1)N)C
OpenEye OEToolkits 1.9.2
Cc1ccc(c(c1)C)N
CACTVS 3.385
Cc1ccc(N)c(C)c1
Formula
C8 H11 N
Name
2,4-dimethylaniline
ChEMBL
CHEMBL1490826
DrugBank
ZINC
ZINC000000900690
PDB chain
5cib Chain C Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
5cib
Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Resolution
3.011 Å
Binding residue
(original residue number in PDB)
H175 A176 L177 G178 T180 G191
Binding residue
(residue number reindexed from 1)
H175 A176 L177 G178 T180 G191
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
R48 H52 H175 G191 D235
Catalytic site (residue number reindexed from 1)
R48 H52 H175 G191 D235
Enzyme Commision number
1.11.1.5
: cytochrome-c peroxidase.
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0020037
heme binding
Biological Process
GO:0006979
response to oxidative stress
GO:0034599
cellular response to oxidative stress
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Molecular Function
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Biological Process
External links
PDB
RCSB:5cib
,
PDBe:5cib
,
PDBj:5cib
PDBsum
5cib
PubMed
27499202
UniProt
P00431
|CCPR_YEAST Cytochrome c peroxidase, mitochondrial (Gene Name=CCP1)
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