Structure of PDB 4m1i Chain C Binding Site BS02
Receptor Information
>4m1i Chain C (length=333) Species:
813
(Chlamydia trachomatis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VPRGSHMQADILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYL
NGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAESLVGN
NIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNA
YNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEG
IFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEE
NPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYVQH
IADRRLERIGLKPIYHTKNPFPWMSETIDLNKE
Ligand information
Ligand ID
MN
InChI
InChI=1S/Mn/q+2
InChIKey
WAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341
[Mn++]
Formula
Mn
Name
MANGANESE (II) ION
ChEMBL
DrugBank
DB06757
ZINC
PDB chain
4m1i Chain C Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4m1i
Structural Basis for Assembly of the Mn(IV)/Fe(III) Cofactor in the Class Ic Ribonucleotide Reductase from Chlamydia trachomatis.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
E89 E120 H123 E227
Binding residue
(residue number reindexed from 1)
E95 E126 H129 E233
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
F127 D226
Catalytic site (residue number reindexed from 1)
F133 D232
Enzyme Commision number
1.17.4.1
: ribonucleoside-diphosphate reductase.
Gene Ontology
Molecular Function
GO:0004748
ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
Biological Process
GO:0009263
deoxyribonucleotide biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4m1i
,
PDBe:4m1i
,
PDBj:4m1i
PDBsum
4m1i
PubMed
23924396
UniProt
O84835
|RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta (Gene Name=nrdB)
[
Back to BioLiP
]