Structure of PDB 4ixv Chain C Binding Site BS02
Receptor Information
>4ixv Chain C (length=306) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HSVAVIGAPFSQGQKRKGVEHGPAAIREAGLMKRLSSLGCHLKDFGDLSF
TPVPKDDLYNNLIVNPRSVGLANQELAEVVSRAVSDGYSCVTLGGDHSLA
IGTISGHARHCPDLCVVWVDAHADINTPLTTSSGNLHGQPVSFLLRELQD
KVPQLPGFSWIKPCISSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDID
RLGIQKVMERTFDLLIGKRQRPIHLSFDIDAFDPTLAPATGTPVVGGLTY
REGMYIAEEIHNTGLLSALDLVEVNPQLATSEEEAKTTANLAVDVIASSF
GQTREG
Ligand information
Ligand ID
MN
InChI
InChI=1S/Mn/q+2
InChIKey
WAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341
[Mn++]
Formula
Mn
Name
MANGANESE (II) ION
ChEMBL
DrugBank
DB06757
ZINC
PDB chain
4ixv Chain C Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4ixv
Synthesis of quaternary alpha-amino acid-based arginase inhibitors via the Ugi reaction.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
H120 D143 D147 D251
Binding residue
(residue number reindexed from 1)
H97 D120 D124 D228
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H120 D143 H145 D147 H160 D251 D253 E296
Catalytic site (residue number reindexed from 1)
H97 D120 H122 D124 H137 D228 D230 E273
Enzyme Commision number
3.5.3.1
: arginase.
Gene Ontology
Molecular Function
GO:0004053
arginase activity
GO:0016813
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
GO:0046872
metal ion binding
Biological Process
GO:0006525
arginine metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4ixv
,
PDBe:4ixv
,
PDBj:4ixv
PDBsum
4ixv
PubMed
23886684
UniProt
P78540
|ARGI2_HUMAN Arginase-2, mitochondrial (Gene Name=ARG2)
[
Back to BioLiP
]