Structure of PDB 4if4 Chain C Binding Site BS02

Receptor Information
>4if4 Chain C (length=208) Species: 158878 (Staphylococcus aureus subsp. aureus Mu50) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDL
ILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDS
YILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTER
EMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIY
AFQHNLIQ
Ligand information
Ligand IDBEF
InChIInChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
InChIKeyOGIAHMCCNXDTIE-UHFFFAOYSA-K
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[Be-](F)(F)F
ACDLabs 10.04
CACTVS 3.341
F[Be-](F)F
FormulaBe F3
NameBERYLLIUM TRIFLUORIDE ION
ChEMBL
DrugBank
ZINC
PDB chain4if4 Chain C Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4if4 Phosphorylation-dependent conformational changes and domain rearrangements in Staphylococcus aureus VraR activation.
Resolution2.35 Å
Binding residue
(original residue number in PDB)
D55 L56 L57 T83 S84 K105
Binding residue
(residue number reindexed from 1)
D54 L55 L56 T82 S83 K104
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0000160 phosphorelay signal transduction system
GO:0006355 regulation of DNA-templated transcription
GO:0046677 response to antibiotic
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:4if4, PDBe:4if4, PDBj:4if4
PDBsum4if4
PubMed23650349
UniProtQ7A2Q1|VRAR_STAAM Response regulator protein VraR (Gene Name=vraR)

[Back to BioLiP]