Structure of PDB 3gli Chain C Binding Site BS02

Receptor Information

>3gli Chain C (length=365) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

QVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTS
IARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVED
TRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFL
LATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRAL
QLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLV
EAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALG
NDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTL
LRALAFHPRMPLPEP

Ligand information

>3gli Chain O (length=27) Species: 83333 (Escherichia coli K-12) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

TSRRDWQLQQLGITQWSLRRPGALQGE

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3gli The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.
Resolution	3.5 Å
Binding residue (original residue number in PDB)	Q296 L297 P299 T323 Q326 Q330 T331 I334 R355 F359
Binding residue (residue number reindexed from 1)	Q293 L294 P296 T320 Q323 Q327 T328 I331 R352 F356

Enzymatic activity

Enzyme Commision number

2.7.7.7: DNA-directed DNA polymerase.

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity
GO:0005524	ATP binding
GO:0016887	ATP hydrolysis activity

	Biological Process
GO:0006260	DNA replication

	Cellular Component
GO:0009360	DNA polymerase III complex

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Cellular Component

External links

PDB	RCSB:3gli, PDBe:3gli, PDBj:3gli
PDBsum	3gli
PubMed	19450514
UniProt	P06710\|DPO3X_ECOLI DNA polymerase III subunit tau (Gene Name=dnaX)

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