Structure of PDB 3dg7 Chain C Binding Site BS02
Receptor Information
>3dg7 Chain C (length=366) Species:
246196
(Mycolicibacterium smegmatis MC2 155) [
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MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPP
RPFTYGETQTGIVAVIEQYFAPALIGLTLTEREVAHTRMARTVGNPTAKA
AIDMAMWDALGQSLRLSVSEMLGGYTDRMRVSHMLGFDDPVKMVAEAERI
RETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAE
SLRAMREMADLDLLFAEELCPADDVLSRRRLVGQLDMPFIADESVPTPAD
VTREVLGGSATAISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDGQIG
TACTVSFGTAFERTSRHAGELSNFLDMSDDLLTVPLQISDGQLHRRPGPG
LGIEIDPDKLAHYRTD
Ligand information
Ligand ID
MUC
InChI
InChI=1S/C6H6O4/c7-5(8)3-4-1-2-6(9)10-4/h1-2,4H,3H2,(H,7,8)/t4-/m1/s1
InChIKey
HPEKPJGPWNSAAV-SCSAIBSYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1=CC(=O)OC1CC(=O)O
OpenEye OEToolkits 1.5.0
C1=CC(=O)O[C@H]1CC(=O)O
CACTVS 3.341
OC(=O)C[C@@H]1OC(=O)C=C1
ACDLabs 10.04
O=C(O)CC1OC(=O)C=C1
CACTVS 3.341
OC(=O)C[CH]1OC(=O)C=C1
Formula
C6 H6 O4
Name
[(2S)-5-oxo-2,5-dihydrofuran-2-yl]acetic acid;
muconolactone
ChEMBL
DrugBank
ZINC
PDB chain
3dg7 Chain C Residue 1003 [
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Receptor-Ligand Complex Structure
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PDB
3dg7
Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
F21 M134 K160 K162 D191 D242 K266 N293 Q294
Binding residue
(residue number reindexed from 1)
F21 M134 K160 K162 D191 D242 K266 N293 Q294
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
L19 P50 R51 M134 K160 K162 D191 N193 E217 D242 E243 S244 K266 G292 N293 Q294 G319 E320 L321
Catalytic site (residue number reindexed from 1)
L19 P50 R51 M134 K160 K162 D191 N193 E217 D242 E243 S244 K266 G292 N293 Q294 G319 E320 L321
Enzyme Commision number
5.5.1.-
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0046872
metal ion binding
Biological Process
GO:0009234
menaquinone biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3dg7
,
PDBe:3dg7
,
PDBj:3dg7
PDBsum
3dg7
PubMed
19220063
UniProt
A0QTN8
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