Structure of PDB 2y65 Chain C Binding Site BS02
Receptor Information
>2y65 Chain C (length=343) Species:
7227
(Drosophila melanogaster) [
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IPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFD
KVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVI
GDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS
KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNE
HSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKKNINKSLSALGN
VISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESET
KSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNARLK
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
2y65 Chain C Residue 603 [
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Receptor-Ligand Complex Structure
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PDB
2y65
The Structure of the Kinesin-1 Motor-Tail Complex Reveals the Mechanism of Autoinhibition.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
R18 R20 P21 T94 S95 G97 K98 T99 H100
Binding residue
(residue number reindexed from 1)
R12 R14 P15 T88 S89 G91 K92 T93 H94
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003777
microtubule motor activity
GO:0005524
ATP binding
GO:0008017
microtubule binding
Biological Process
GO:0007018
microtubule-based movement
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Molecular Function
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Biological Process
External links
PDB
RCSB:2y65
,
PDBe:2y65
,
PDBj:2y65
PDBsum
2y65
PubMed
21836017
UniProt
P17210
|KINH_DROME Kinesin heavy chain (Gene Name=Khc)
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