Structure of PDB 1yv0 Chain C Binding Site BS02

Receptor Information
>1yv0 Chain C (length=148) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP
TKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQELANCFRIFDKNADGFID
IEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGVQ
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain1yv0 Chain C Residue 163 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1yv0 Ca2+-regulated structural changes in troponin
Resolution7.0 Å
Binding residue
(original residue number in PDB)
N143 D145 E152
Binding residue
(residue number reindexed from 1)
N130 D132 E139
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) V45
Catalytic site (residue number reindexed from 1) V42
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0046872 metal ion binding
Biological Process
GO:0003009 skeletal muscle contraction
Cellular Component
GO:0005861 troponin complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1yv0, PDBe:1yv0, PDBj:1yv0
PDBsum1yv0
PubMed15784741
UniProtP02588|TNNC2_CHICK Troponin C, skeletal muscle (Gene Name=TNNC2)

[Back to BioLiP]