Structure of PDB 1vzm Chain C Binding Site BS02

Receptor Information
>1vzm Chain C (length=41) Species: 172269 (Argyrosomus regius) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LTLAQTESLREVCETNMACDEMADAQGIVAAYQAFYGPIPF
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain1vzm Chain C Residue 1047 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1vzm Structural Evidence of a Fourth Gla Residue in Fish Osteocalcin: Biological Implications
Resolution1.4 Å
Binding residue
(original residue number in PDB)
E18 D24
Binding residue
(residue number reindexed from 1)
E14 D20
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0030500 regulation of bone mineralization
GO:0032571 response to vitamin K
GO:0060348 bone development
GO:1900076 regulation of cellular response to insulin stimulus
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1vzm, PDBe:1vzm, PDBj:1vzm
PDBsum1vzm
PubMed15667217
UniProtQ800Y1|OSTCN_ARGRE Osteocalcin (Gene Name=bglap)

[Back to BioLiP]