Structure of PDB 1oct Chain C Binding Site BS02
Receptor Information
>1oct Chain C (length=131) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALN
LSFKNMCKLKPLLEKWLNDAERKKRTSIETNIRVALEKSFLENQKPTSEE
ITMIADQLNMEKEVIRVWFCNRRQKEKRINP
Ligand information
>1oct Chain B (length=15) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
accttatttgcatac
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1oct
Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
S43 T46 R49 S56 N59 K62 R102 R105 K125 S128 R146 R153
Binding residue
(residue number reindexed from 1)
S39 T42 R45 S52 N55 K58 R72 R75 K95 S98 R116 R123
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1oct
,
PDBe:1oct
,
PDBj:1oct
PDBsum
1oct
PubMed
8156594
UniProt
P14859
|PO2F1_HUMAN POU domain, class 2, transcription factor 1 (Gene Name=POU2F1)
[
Back to BioLiP
]