Structure of PDB 1nkk Chain C Binding Site BS02

Receptor Information
>1nkk Chain C (length=226) Species: 10359 (Human betaherpesvirus 5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QQSQAVAPVYVGGFLARYDQSPDEARLLLPRDVVEHWLHAQVALPLNINH
DDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVS
PLQPDKVVEFLSGSYAGLSLSSRRCDDVETTPFKHVALCSVGRRRGTLAV
YGRDPEWVTQRFPDLTAADRDGLRAQWQRCGDPFRSDSYGLLGNSVDALY
IRERLPKLRYDKQLVGVTERESYVKA
Ligand information
Receptor-Ligand Complex Structure
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PDB1nkk Structural and Biochemical Studies of Inhibitor Binding to Human Cytomegalovirus Protease
Resolution2.6 Å
Binding residue
(original residue number in PDB)		H1063 S1132 R1165
Binding residue
(residue number reindexed from 1)		H50 S119 R143
Enzymatic activity
Enzyme Commision number 3.4.21.97: assemblin.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:1nkk, PDBe:1nkk, PDBj:1nkk
PDBsum1nkk
PubMed12549906
UniProtP16753|SCAF_HCMVA Capsid scaffolding protein (Gene Name=UL80)

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