Structure of PDB 1njt Chain C Binding Site BS02
Receptor Information
>1njt Chain C (length=222) Species:
10359
(Human betaherpesvirus 5) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DEQQSQAVAPVYVGGFLARYDQSPDEAELLLPRDVVEHWLHAALPLNINH
DDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGPVS
PLQPDKVVEFLSGSYAGLSLSSRRCDTTPFKHVALCSVGRRRGTLAVYGR
DPEWVTQRFPDLTAADRDGLRAQWQSGDPFRSDSYGLLGNSVDALYIRER
LPKLRYDKQLVGVTERESYVKA
Ligand information
>1njt Chain H (length=4) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
VDNA
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1njt
Structural and Biochemical Studies of Inhibitor Binding to Human Cytomegalovirus Protease
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
H1063 S1132 R1165
Binding residue
(residue number reindexed from 1)
H50 S119 R140
Enzymatic activity
Enzyme Commision number
3.4.21.97
: assemblin.
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1njt
,
PDBe:1njt
,
PDBj:1njt
PDBsum
1njt
PubMed
12549906
UniProt
P16753
|SCAF_HCMVA Capsid scaffolding protein (Gene Name=UL80)
[
Back to BioLiP
]