Structure of PDB 1cjt Chain C Binding Site BS02
Receptor Information
>1cjt Chain C (length=330) Species:
9913
(Bos taurus) [
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ATHRLLLLGAGESGKSTIVKQMRILHVGEKATKVQDIKNNLKEAIETIVA
AMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDEG
VRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLTSGIF
ETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIR
EDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKI
EDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHY
CYPHFTCAVDTENIRRVFNDCRDIIQRMHL
Ligand information
Ligand ID
GSP
InChI
InChI=1S/C10H16N5O13P3S/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(26-9)1-25-29(19,20)27-30(21,22)28-31(23,24)32/h2-3,5-6,9,16-17H,1H2,(H,19,20)(H,21,22)(H2,23,24,32)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey
XOFLBQFBSOEHOG-UUOKFMHZSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
ACDLabs 10.04
S=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O
Formula
C10 H16 N5 O13 P3 S
Name
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
ChEMBL
CHEMBL1204628
DrugBank
DB01864
ZINC
ZINC000008217391
PDB chain
1cjt Chain C Residue 405 [
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Receptor-Ligand Complex Structure
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PDB
1cjt
Two-metal-Ion catalysis in adenylyl cyclase.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
G49 E50 S51 G52 K53 S54 T55 D173 L198 R199 T204 G226 N292 K293 D295 L296 C365 A366 V367
Binding residue
(residue number reindexed from 1)
G11 E12 S13 G14 K15 S16 T17 D115 L140 R141 T146 G168 N234 K235 D237 L238 C307 A308 V309
Annotation score
3
Enzymatic activity
Catalytic site (original residue number in PDB)
E50 T55 R201 D223 Q227
Catalytic site (residue number reindexed from 1)
E12 T17 R143 D165 Q169
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003924
GTPase activity
GO:0005525
GTP binding
GO:0019001
guanyl nucleotide binding
GO:0031683
G-protein beta/gamma-subunit complex binding
Biological Process
GO:0007165
signal transduction
GO:0007186
G protein-coupled receptor signaling pathway
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:1cjt
,
PDBe:1cjt
,
PDBj:1cjt
PDBsum
1cjt
PubMed
10427002
UniProt
P04896
|GNAS2_BOVIN Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (Gene Name=GNAS)
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