Structure of PDB 8oiq Chain Bn Binding Site BS02

Receptor Information
>8oiq Chain Bn (length=354) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RRAAPLGPMPNEDIDVSDLERLKKYRSFDRYRRRAEQEARKPHWWRTYRE
HFGEESGPKDRVDIGLPPPKVSRTQQLLERKQALRELRANVEEERAARLQ
TARIPLEAVRAEWERTCGPYHKQRLAEYCGLYRDLFHGATFVPRVPLHVA
YAVGEDDLMPVYHGNEVTPTEAAQAPEVTYEADEGSLWTLLLTNLDGHLL
EPDAEYVHWLVTNIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQD
KRIDFSGDTRPSPCYQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDS
VTRVFHQLLDMREPVFEFVRPPPYHPKQKRFPHRQPLRYLDRYRDSHEPT
YGIY
Ligand information
>8oiq Chain B9 (length=73) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guuaauguagcuuaaauuaucaaagcaaggcacugaaaaugccuagauga
gccucacagcuccauaaacacca
<<<.<<<..<<<...........>>>.<<<<<.......>>>>>....<<
<<......>>>>>>>.>>>....
Receptor-Ligand Complex Structure
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PDB8oiq Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		R52 S53 R56 P94 K96 S98 R99 T100 L103 R106 K107 T142 Y146
Binding residue
(residue number reindexed from 1)		R26 S27 R30 P68 K70 S72 R73 T74 L77 R80 K81 T116 Y120
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005739 mitochondrion
GO:0005762 mitochondrial large ribosomal subunit
GO:0005829 cytosol
GO:0005840 ribosome

View graph for
Cellular Component
External links
PDB RCSB:8oiq, PDBe:8oiq, PDBj:8oiq
PDBsum8oiq
PubMed37141370
UniProtF1RW03

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