Structure of PDB 8apn Chain Bi Binding Site BS02

Receptor Information
>8apn Chain Bi (length=282) Species: 353565 (Polytomella magna) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SWQEHTVENFSIKPSYLSPLFATYQTETEKDDRRRLLLQLLKAHKLLSHE
VEGLDSEQIQRGTRYRIAQMKELASDLRLLLKGDNQPINFTTCTDKSLMY
GFYNLLESETSVWEHWASHFVEKYKGTPGLEPLEVIFSRQDPMLILEQAG
ACMTLDGVAETIGKRKSALAKVLMRRGTGKIIVNGLPYDAYFRDVEVRAL
MLQPFFACDGLGRFDVEVEVEGSGPSAQAQAIRTGIARALKLHYPDVPNA
DLEKLSIWDGRKVERKKPGRHKARRGFQWVKR
Ligand information
>8apn Chain B4 (length=337) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaaccacgguauugcauggcugauauauaauccauacaaaggauauaacc
aaguagcauggucuuauauugugggcuggcggugugcuacaaguaacaaa
aaguacaaccggauuaauuacugaaaucauaaauauaaagagggaaucgc
uaguaaucuuuauuauaacauaaaggugaaccaguuuagugugcacacac
ugcccgucacauccgggaaaaccacaaagcccuaaguuuguauaguguuu
aauaaaccaauucaaacauaagcuuauuguuaacaaggaugaagucguaa
caagguuugcguaggggaaccugcucaagauuaugcu
.......<<.<<...<<<<<<.....<<<.<<<.......>>>>>>....
.>>>..>>>.>>>>...............................<<...
..>>.....<....<<.<<<.........>>>.>>....>..........
.....<<<<<<<<......>>>>>>>>.......................
.<..<<.<.<<<<<..<..<<<.<..<<<<....<<<<<<.<<.<.<<..
.....>>>.>>.>>>>>.>..>>>>.>.>>>..>..>>>>>..>.>>...
>.....<<<.<<<<<....>>>>>.>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8apn Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		A243 G244 K258 K260 S317 S320 A321 R332 K335 W352 G354 R355 K356 V357 E358 R359 K360 K361 P362 G363 K366 R368 R369 Q372 V374
Binding residue
(residue number reindexed from 1)		A149 G150 K164 K166 S223 S226 A227 R238 K241 W258 G260 R261 K262 V263 E264 R265 K266 K267 P268 G269 K272 R274 R275 Q278 V280
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 19:38:17 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8apn', asym_id = 'Bi', bs = 'BS02', title = 'Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8apn', asym_id='Bi', bs='BS02', title='Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '8apn', asym_id = 'Bi'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='8apn', asym_id='Bi')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>