Structure of PDB 4v7j Chain Bg Binding Site BS02
Receptor Information
>4v7j Chain Bg (length=155) Species:
300852
(Thermus thermophilus HB8) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYRW
Ligand information
>4v7j Chain Bw (length=77) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgcgggguggagcagccugguagcucgucgggcucauaacccgaaggucg
ucgguucaaauccggcccccgcaacca
.<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<
<<<<.......>>>>>>>>>>>.....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4v7j
The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
S77 N84 Q86 M144 N148
Binding residue
(residue number reindexed from 1)
S76 N83 Q85 M143 N147
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003723
RNA binding
GO:0003729
mRNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0000028
ribosomal small subunit assembly
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:0015935
small ribosomal subunit
GO:0022627
cytosolic small ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4v7j
,
PDBe:4v7j
,
PDBj:4v7j
PDBsum
4v7j
PubMed
20005802
UniProt
P17291
|RS7_THET8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)
[
Back to BioLiP
]