Structure of PDB 4v8y Chain BS Binding Site BS02

Receptor Information

>4v8y Chain BS (length=172) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MAHFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHK
VKKASGEIVSINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRV
AAVETLYQDMAARHRARFRSIHILKVAEIEKTADVKRQYVKQFLTKDLKF
PLPHRVQKSTKTFSYKRPSTFY

Ligand information

>4v8y Chain B7 (length=121) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacugu
aguuaagcugguaagagccugaccgaguaguguagugggugaccauacgc
gaaacucaggugcugcaaucu

<<<<<<<<<....<<<<<<<<.....<<.<<..............>>...
.>>....>>>>>>.>><<<<<<.......<<<<<..<<....>>.>>>>>
.....>>>>>>>>>>>>>>>.

Receptor-Ligand Complex Structure

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Structure summary

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PDB	4v8y Molecular architecture of a eukaryotic translational initiation complex.
Resolution	4.3 Å
Binding residue (original residue number in PDB)	R13 S39 R40 Y43 Q46 H49 K50 V51 K52 K53 A54 R84 R117 R119
Binding residue (residue number reindexed from 1)	R13 S39 R40 Y43 Q46 H49 K50 V51 K52 K53 A54 R84 R117 R119

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Cellular Component

External links

PDB	RCSB:4v8y, PDBe:4v8y, PDBj:4v8y
PDBsum	4v8y
PubMed	24200810
UniProt	P0CX24\|RL20B_YEAST Large ribosomal subunit protein eL20B (Gene Name=RPL20B)

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