Structure of PDB 4wpo Chain BM Binding Site BS02
Receptor Information
>4wpo Chain BM (length=123) Species:
300852
(Thermus thermophilus HB8) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEA
EVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQ
RTRTNARTRKGPRKTVAGKKKAP
Ligand information
>4wpo Chain BW (length=74) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gcccggauagcucaggguagagcaggggauugaaaauccccguguccuug
guucgauuccgaguccgggcacca
<<<<<<<..<<<<......>>>><<<<<<<.....>>>>>>.>...<<<<
<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4wpo
Conformational Changes of Elongation Factor G on the Ribosome during tRNA Translocation.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
K120 K121 K122 A123
Binding residue
(residue number reindexed from 1)
K119 K120 K121 A122
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003676
nucleic acid binding
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0006412
translation
Cellular Component
GO:0005829
cytosol
GO:0005840
ribosome
GO:0015935
small ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4wpo
,
PDBe:4wpo
,
PDBj:4wpo
PDBsum
4wpo
PubMed
25594181
UniProt
P80377
|RS13_THET8 Small ribosomal subunit protein uS13 (Gene Name=rpsM)
[
Back to BioLiP
]