Structure of PDB 4wt8 Chain BG Binding Site BS02
Receptor Information
>4wt8 Chain BG (length=155) Species:
300852
(Thermus thermophilus HB8) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQ
EKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLAL
RWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAY
AHYRW
Ligand information
>4wt8 Chain D3 (length=76) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gcccggauagcucagucgguagagcaggggauugaaaauccccguguccu
ugguucgauuccgaguccgggcacca
<<<<<<<..<<<<........>>>>.<<<<<<.....>>>>>>.....<<
<<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4wt8
Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics.
Resolution
3.4 Å
Binding residue
(original residue number in PDB)
R79 Q86 R143 M144 A147 N148
Binding residue
(residue number reindexed from 1)
R78 Q85 R142 M143 A146 N147
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003723
RNA binding
GO:0003729
mRNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0000028
ribosomal small subunit assembly
GO:0006412
translation
Cellular Component
GO:0005840
ribosome
GO:0015935
small ribosomal subunit
GO:0022627
cytosolic small ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4wt8
,
PDBe:4wt8
,
PDBj:4wt8
PDBsum
4wt8
PubMed
25562208
UniProt
P17291
|RS7_THET8 Small ribosomal subunit protein uS7 (Gene Name=rpsG)
[
Back to BioLiP
]