Structure of PDB 8ewb Chain BF Binding Site BS02

Receptor Information

>8ewb Chain BF (length=206) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

FTPVVLATPIPEEVQQAQTEIKLFNKWSFEEVEVKDASLVDYVQVRQPIF
VAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLD
IINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDVSPLRRVN
QAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELER
VAKSNR

Ligand information

>8ewb Chain EC (length=153) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

aaacuccauguauugguuacccaucugcaucgaaaacucuccgaacacgg
ugcaguaaggcuuucauggagugguuacguguaaggagaaagucccaguc
acuuugggcaaaguagacagccgcgcuugcguggugggacuuaauuaaug
ccu

...<<<<<<<..............<<<<<<........((((.......>
>>>>>.........>>>>>>>.............)))).........<<<
<<<<.((((.>>>>.>>>..<<<<<....>>>>>...............)
)))

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	8ewb Regulation of translation by ribosomal RNA pseudouridylation.
Resolution	2.87 Å
Binding residue (original residue number in PDB)	G153 A154
Binding residue (residue number reindexed from 1)	G134 A135

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003729	mRNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:8ewb, PDBe:8ewb, PDBj:8ewb
PDBsum	8ewb
PubMed	37595043
UniProt	A0A1L4AA68

[Back to BioLiP]