Structure of PDB 4ujc Chain BD Binding Site BS02

Receptor Information
>4ujc Chain BD (length=290) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTN
RDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLAR
RLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN
KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADY
MRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKP
KKEVKKKRWNRPKMSLAQKKDRVAQKKASFLRAQERAAES
Ligand information
>4ujc Chain A4 (length=119) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaa
gcuaagcagggucgggccugguuaguacuuggaugggagaccgccuggga
auaccgggugcuguaggcu
.<<<<<<<<....<<<<<<<<.....<<.<<..............>>...
>>....>>>>>>.>>.<<<<<<.....<<.<<..<<....>>.>>.>>..
..>>>>>>.>>>>>>>>..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4ujc Structure of the Mammalian 80S Initiation Complex with Initiation Factor 5B on Hcv-Ires RNA.
Resolution9.5 Å
Binding residue
(original residue number in PDB)		K8 K10 F13 K14 Y16 V18 F20 R21 R22 R24 K27 T28 R33 R50 R54 T56 N57 R58 E70 D72 M73 I74 Y79 G91 T93 N94 Y95 R152 T155 G156 N157 K158 N203 V204 Y207 L211 Q222 F223 Q225 Y253 K255 K258 E260 K262 K264 W266 N267 R268 K270 M271 L273 K276 K283
Binding residue
(residue number reindexed from 1)		K1 K3 F6 K7 Y9 V11 F13 R14 R15 R17 K20 T21 R26 R43 R47 T49 N50 R51 E63 D65 M66 I67 Y72 G84 T86 N87 Y88 R145 T148 G149 N150 K151 N196 V197 Y200 L204 Q215 F216 Q218 Y246 K248 K251 E253 K255 K257 W259 N260 R261 K263 M264 L266 K269 K276
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Dec 2 20:22:25 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4ujc', asym_id = 'BD', bs = 'BS02', title = 'Structure of the Mammalian 80S Initiation Complex with Initiation Factor 5B on Hcv-Ires RNA.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4ujc', asym_id='BD', bs='BS02', title='Structure of the Mammalian 80S Initiation Complex with Initiation Factor 5B on Hcv-Ires RNA.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003735,0005840,0006412,0008097', uniprot = '', pdbid = '4ujc', asym_id = 'BD'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412,0008097', uniprot='', pdbid='4ujc', asym_id='BD')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>