Structure of PDB 6yw5 Chain BB Binding Site BS02

Receptor Information
>6yw5 Chain BB (length=290) Species: 367110 (Neurospora crassa OR74A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DEEALKLKQQIEAIPGNFKLFKQTKAQTQKLGAGVEVRYIPEQYLRNPPS
DASLEDLMAAQAHMGHNTSLWNPANARYIYGVRQGIHIISLETTATHLRR
AARVVEEVAYRGGLILFVGTRPGQRPIVVRAAELAKACHLFTKWRPGTIT
NREQLLGGVPLTVVDELDRPLSGFEDHLHDRRPLAPDLVVCLNPKENMTL
LYECSLAKIPTIGIIDTNTNPSWVTYQIPANDDSLRATALISGVLGRAGE
RGQKRRLEAAQRGVVTWKTPADVQGYFELASARAADARRR
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6yw5 Chain BB Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6yw5 Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Resolution2.85 Å
Binding residue
(original residue number in PDB)		H172 D322 D338 D339
Binding residue
(residue number reindexed from 1)		H66 D216 D232 D233
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005739 mitochondrion
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6yw5, PDBe:6yw5, PDBj:6yw5
PDBsum6yw5
PubMed33056988
UniProtV5ILE0|RT04_NEUCR Small ribosomal subunit protein uS2m (Gene Name=mrp4)

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