Structure of PDB 8yon Chain B Binding Site BS02

Receptor Information
>8yon Chain B (length=441) Species: 2681598 (Escherichia phage T4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MQLNNRDLKSIIDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDL
ARGNKDKFHKLASIAGGVADLGYHHGENSAQDAGALMANTWNNNFPLLDG
QGNFGSRTVQKAAASRYIFARVSKNFYNVYKDTEYAPVHQDKEHIPPAFY
LPIIPTVLLNGVSGIATGYATYILPHSVSSVKKAVLQALQGKKVTKPKVE
FPEFRGEVVEIDGQYEIRGTYKFTSRTQMHITEIPYKYDRETYVSKILDP
LENKGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMKDFGLIER
RSQNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAF
RLAFAKAHFIKKVISGEIVVQGKTRKELTEELSKIDMYSSYVDKLVGMNI
FHMTSDEAKKLAEEAKAKKEENEYWKTTDVVTEYTKDLEEI
Ligand information
>8yon Chain F (length=50) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atatatatatatatgtgtatatatacacacatacatatacatatatatgc
Receptor-Ligand Complex Structure
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PDB8yon structure of phage T6 full-length topoisomerase II bound with DNA
Resolution6.73 Å
Binding residue
(original residue number in PDB)		I165 A166 T167 G168 Q214 K293 R300 R301 N304
Binding residue
(residue number reindexed from 1)		I165 A166 T167 G168 Q214 K293 R300 R301 N304
External links
PDB RCSB:8yon, PDBe:8yon, PDBj:8yon
PDBsum8yon
PubMed
UniProtP07065|TOP5_BPT4 DNA topoisomerase medium subunit (Gene Name=52)

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