Structure of PDB 8wam Chain B Binding Site BS02
Receptor Information
>8wam Chain B (length=551) Species:
3702
(Arabidopsis thaliana) [
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CFPITLKFVDVCYRVEERTILSGVTGMISPGEFMAVLGPSGSGKSTLLNA
VAGRLHGSNLTGKILINDGKITKQTLKRTGFVAQDDLLYPHLTVRETLVF
VALLRLPRSLTRDVKLRAAESVISELGLTKCENTVVGNTFIRGISGGERK
RVSIAHELLINPSLLVLDQPTSGLDATAALRLVQTLAGLAHGKGKTVVTS
IHQPSSRVFQMFDTVLLLSEGKCLFVGKGRDAMAYFESVGFSPAFPMNPA
DFLLDLANVRQTLVTAYDTLLAPQVKTCIEGITTCIATWFSQLCILLHRL
LKERRHESFDLLRIFQVVAASILCGLMWWHSDYRDVHDRLGLLFFISIFW
GVLPSFNAVFTFPQERAIFTRERASGMYTLSSYFMAHVLGSLSMELVLPA
SFLTFTYWMVYLRPGIVPFLLTLSVLLLYVLASQGLGLALGAAIMDAKKA
STIVTVTMLAFVLTGGYYVNKVPSGMVWMKYVSTTFYCYRLLVAIQYGSG
EEILRMLGAGCRFVEEEVIGDVGMWTSVGVLFLMFFGYRVLAYLALRRIK
H
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
8wam Chain B Residue 1501 [
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Receptor-Ligand Complex Structure
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PDB
8wam
Real-space refinement in PHENIX for cryo-EM and crystallography
Resolution
3.23 Å
Binding residue
(original residue number in PDB)
V49 I83 S103 G104 S105 G106 K107 S108 T109
Binding residue
(residue number reindexed from 1)
V15 I20 S40 G41 S42 G43 K44 S45 T46
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0015562
efflux transmembrane transporter activity
GO:0016887
ATP hydrolysis activity
GO:0042626
ATPase-coupled transmembrane transporter activity
GO:0140359
ABC-type transporter activity
Biological Process
GO:0009408
response to heat
GO:0009409
response to cold
GO:0009737
response to abscisic acid
GO:0009738
abscisic acid-activated signaling pathway
GO:0010496
intercellular transport
GO:0048581
negative regulation of post-embryonic development
GO:0055085
transmembrane transport
GO:0080168
abscisic acid transport
GO:0140352
export from cell
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8wam
,
PDBe:8wam
,
PDBj:8wam
PDBsum
8wam
PubMed
38050355
UniProt
Q84TH5
|AB25G_ARATH ABC transporter G family member 25 (Gene Name=ABCG25)
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