Structure of PDB 8wa1 Chain B Binding Site BS02

Receptor Information
>8wa1 Chain B (length=998) Species: 4097 (Nicotiana tabacum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVE
TYQLVEPLIKERDAVYESLTYSSELYVSAGLIWKNSRDMQEQTIFIGNIP
LMNSLGTSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDWG
GRSELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILENVCYPEIFL
SFLFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILAAADHLIGLK
FGMGALDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHK
LIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLG
PGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHW
GSLESPFYEISERSTGVRMLYLSPGRDEYYMVAAGNSLALNQDIQEEQVV
PARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSN
MQRQAVPLSRSEKCIVGTGLERQAALDSGALAIAEREGRVVYTNTDKILL
AGNGDILSIPLVIYQRSNKNTCMHQKLQVPRGKCIKKGQILADGAATVGG
ELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHV
TSQGPEKVTNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQSK
ETCLKLPIGGRGRVIDVRWIQKRGGSSYNPETIRVYILQKREIKVGDKVA
GRHGNKGIISKILPRQDMPYLQDGRSVDMVFNPLGVPSRMNVGQIFECSL
GLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEY
PGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQ
QPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLG
TTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKE
Ligand information
Receptor-Ligand Complex Structure
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PDB8wa1 Cryo-EM structures of the plant plastid-encoded RNA polymerase.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		R120 G370 R404 G976 R977 M988
Binding residue
(residue number reindexed from 1)		R115 G323 R357 G905 R906 M917
Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0009507 chloroplast

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8wa1, PDBe:8wa1, PDBj:8wa1
PDBsum8wa1
PubMed38428393
UniProtP06271|RPOB_TOBAC DNA-directed RNA polymerase subunit beta (Gene Name=rpoB)

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