Structure of PDB 8srf Chain B Binding Site BS02 |
| >8srf Chain B (length=1377) Species: 946362 (Salpingoeca rosetta)
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SVAAKTLLIENEDGKGSTRMEVQDFMKRFHMHASEDDKTGSPSTAWGTLR
FPTKEATAPYLRLSVNDDPEDALLFVKAMLAQKYGETYDRPSLILSVTGG
ARNFTLPPRLETAIAKGLRLAAQRTNAWVVTGGTNTGVMKLTGQIMEALS
KTQSHFIPPTIGIATYGVIIGGDDMTRGEPPKIGLEYEMHKKDPPKTTPL
DDNHNLFLLVDDGSTNKFGKEIKFRAAFENAAGQAFAAPVVTIVVQGGPG
TLGTALQAVRQGTPIVVVDGSGLAADVLAYAYNFMHNPLTRFKSYTIDDL
RQKVAQTFNPKSSQQLTNLLDSALECVQDPNLVVVYSLQESGIDEFDDCI
LKAIFSSQGKLGNKLKQAMYFDQLDVAKRALSEASKNGQHNEIAACINDN
LMAAMMHNKPHFVELYLGFDAKIYELKPSEEVAKTNITALDELPSFALAI
EELYKREAKKPHSHVQRLVSLSNTDVLGRHYRGRDLANTRAYNVLRMDQI
FARLVSKDFSVNRDFTIYDSKYDKVPGIQFRRTAQASHMLFLWAICLDRF
RMARHFWLIGDQSIINALVASRILERLSTHRALQGPHLAEERAKMQHNAK
KFEELAVGVLGECHGSDSHMASEMLHSKNDMFNKKNAINIAYDAKSLAFL
SHPATQSVINADWYGHLKSVTSFWAVLFAFFFPFFVLPFINFSGAHRLRR
KFAKFYSAPYTRFISDLLSHFVLCVVTSYFVLDKLEDTISAIEWILLVWF
VALLLEELRQMIFCDGIAEYISDTWNRLDLIMITLFFVGFFTHASDPSNQ
DSKVVSKGIHAFLVVVLWLRFMRYYALSKNLGPKLIMMMEMMKDVSTFVF
LLLIFLIGYGVAAQSLLSPDEDFSSRTFIGVLFRPYFQIYGELFLDDLNS
EANCLGDTPFTECSRETVRMVPFFLAVYILGSNVLLVNLLIAMFNDTYMK
VQEAAEDLWRKQNYELCAEYKDRPFLPAPFILLAHVHMLFMRLLRLCGVH
TQEHEKIQDDETKRKITTFEELNTDKFLRRWERERQEMLEARVKMTNDNV
VQAMGMMDQLLEHMISFRFSLDQQATKIPINRLNSAVAVHGHTAEAAEWY
VPPEEYPKSGGVKRYLIDASMVPLSIMCPSYDPVEYTHPSVAAQPVWADP
ADPRKIKFNVKDEVNGKVVDRTSCHPSGISIDSNTGRPINPWGRTGMTGR
GLLGKWGVNQAADTVVTRWKRSPDGSILERDGKKVLEFVAIQRQDNKMWA
IPGGFVDNGEDVALTSGREFMEEALGMGTSADLMSAESKDSLAALFSSGT
IVARIYCEDPRNTDNAWVETTCVNFHDESGRHAARLKLQGGDDAEHARWM
MVHGGLNLFASHRTLLQHVTSALNAYF |
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| Ligand ID | RP5 |
| InChI | InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5-/m1/s1 |
| InChIKey | KTVPXOYAKDPRHY-TXICZTDVSA-N |
| SMILES | | Software | SMILES |
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| CACTVS 3.370 | O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH]1O | | OpenEye OEToolkits 1.7.0 | C([C@@H]1[C@H]([C@H]([C@@H](O1)O)O)O)OP(=O)(O)O | | OpenEye OEToolkits 1.7.0 | C(C1C(C(C(O1)O)O)O)OP(=O)(O)O | | CACTVS 3.370 | O[C@@H]1O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]1O | | ACDLabs 12.01 | O=P(O)(O)OCC1OC(O)C(O)C1O |
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| Formula | C5 H11 O8 P |
| Name | 5-O-phosphono-beta-D-ribofuranose;
[(2R,3S,4S,5R)-3,4,5-TRIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN PHOSPHATE;
5-O-phosphono-beta-D-ribose;
5-O-phosphono-D-ribose;
5-O-phosphono-ribose |
| ChEMBL | CHEMBL1235722 |
| DrugBank | DB04352 |
| ZINC | ZINC000004228241
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| PDB chain | 8srf Chain B Residue 1501
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