Structure of PDB 8rdw Chain B Binding Site BS02

Receptor Information
>8rdw Chain B (length=368) Species: 45610 (Psychrobacter urativorans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KATLKSLRETKANPAVSIFVKTHREHPANDQDPIALKNQLKIVEERLTNE
FDKRTATTILDKIHAETKEYNHKYNLDTLAIFASVDDVQLIRMPLDTPER
VVISNRFATRDLVRDMASAVHYYTVVLTRDKARLIEAANDRVVAEFDTDN
AKQNNMEGIPFPIDNNGLYTTGDGGSDRSANNENSYLKEFFNQVDKSVQE
LWGEHKMPLVIVGDVRNISYYKEVCDRPENIIATVSNLTELEDGNAQRII
DGVQDAVEGYRTSLHEAALGEIDKARGANALSTDLQDVYRAAFQGAGETL
YVRRGYIQAAKVDEDAQTLTMADAAADGVTDDAVGLIIEHVINNGGKAVF
MPQEMMSADQPIALVTRY
Ligand information
>8rdw Chain iN (length=1503) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacugaagaguuugaucauggcucagauugaacgcuggcggcaggcuua
acacaugcaagucgagcgguaacaggagaagcuugcuucuugcugacgag
cggcggacgggugaguaauacuuaggaaucuaccuaguagugggggauag
cucggggaaacucgaauuaauaccgcauacgaccuacgggagaaaggggg
cucucgcuauuagaugagccuaagucggauuagcuagauggugggguaaa
ggccuaccauggcgacgaucuguagcuggucugagaggaugaucagccac
accgggacugagacacggcccggacuccuacgggaggcagcaguggggaa
uauuggacaaugggggcaacccugauccagccaugccgcgugugugaaga
aggccuuuugguuguaaagcacuuuaagcagugaagaagacuccgugguu
aauacccacggacgaugacauuagcugcagaauaagcaccggcuaacucu
gugccagcagccgcgguaauacagagggugcaagcguuaaucggaauuac
ugggcguaaagggagcguagguggcucgauaagucagaugugaaaucccc
gggcuuaaccugggaacugcaucugauacuguugagcuagaguaugugag
aggaagguagaauuccagguguagcggugaaaugcguagagaucuggagg
aauaccgauggcgaaggcagccuucuggcauaauacugacacugaggcuc
gaaagcguggguagcaaacaggauuagauacccugguaguccacgccgua
aacgaugucuacuagucguuggguccggacuuagugacgcagcuaacgca
auaaguagaccgccuggggaguacggccgcaagguuaaaacucaaaugaa
uugacgggggcccgcacaagcgguggagcauguuguuuaauucgaugcaa
cgcgaagaaccuuaccuggucuugacauaucuagaauccugcagagaugc
gggagugccuucgggaauuagaauacaggugcugcauggcugucgucagc
ucgugucgugagauguuggguuaagucccgcaacgagcgcaacccuuguc
cuuaguuaccagggaacucuaaggauacugccagugacaaacuggaggaa
ggcggggacgacgucaagucaucauggcccuuacgaccagggcuacacac
gugcuacaaugguagguacagagggcagcuacacagcgaugugaugcgaa
ucucaaaaagccuaucguaguccggauuggagucugcaacucgacuccau
gaaguaggaaucgcuaguaaucgcggaucagaaugccgcggugaauacgu
ucccgggccuuguacacaccgcccgucacaccaugggaguugauugcacc
agaaguggauagcuuaaccuucgggaaggcguucaccacggugugguuga
ugacuggggugaagucguaacaagguagccguaggggaaccugcggcugg
auc
........<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<....
.<<<.<<<..<<<..<<.<<..<<<<<<..........>>>.>>>>>..>
>>>>......<<.......<<<<<<<..<<...<<<<<<<<<.<<....<
.<<<<......>>>>.>.....>>.>......<<....>>.....<<<<.
.>>>>>>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<<.....
..>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>
.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>.....
....<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<.....
.<<<<....>>>>.....>>>>...<.<<<<<.........<<<<<<<..
.....>>>>>>>...........>>>>>....>..<<<<<(((...<<<<
<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>........
..<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<
<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<..
.<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>.
..........<<....>>.>>>>>>>..>>>.>>>>>...>>>...>>>>
....<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>....
......<<<<<<..<<<<<<<<<<<<>>>>>>>>>>>>...<<..))>>.
....>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).
]<<<<<.<<<<<<<.<<.<<<<<<..<<<<<<<.<<......<<......
..>>..........<<<<<<<......<<<<<<<..<<<<<<<....>>>
>>>>...<<<..>>>..>>>>>.>>.<<<.<<<..<<<<<<.......<<
<<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<<<<
<<<<<...<<..>>....>>>>>>>>....<<<<<.....>>>>>.....
...>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>..>>
>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>...
.>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>.
...>.....>>>>>>....<<<<<<<.........>>>>>>>......>>
...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<<<<<<<<<<
....<<<<<<.<<<<..<<....>>.>>>>>>>>>>...>>>>>>>>>>>
>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>>>..
...
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8rdw A new family of bacterial ribosome hibernation factors
Resolution2.74 Å
Binding residue
(original residue number in PDB)
H27 I35 K38 N39
Binding residue
(residue number reindexed from 1)
H26 I34 K37 N38
Enzymatic activity
Enzyme Commision number ?
External links