Structure of PDB 8rb8 Chain B Binding Site BS02

Receptor Information
>8rb8 Chain B (length=113) Species: 322710 (Azotobacter vinelandii DJ) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IEATLALTVMGVLLGCGLGLAARKFGGVGLAEKLAAAPMLARVEASQCIG
CTRCYRACPTDAIVGASGQVHVVLEDACTGCGKCRDACPEDCVLLIPQEQ
TLDTWRWDKPAAA
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain8rb8 Chain B Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8rb8 Architecture of the RNF1 complex that drives biological nitrogen fixation.
Resolution3.41 Å
Binding residue
(original residue number in PDB)		C109 I110 G111 C112 T113 R114 C115 V133 C149 C153
Binding residue
(residue number reindexed from 1)		C48 I49 G50 C51 T52 R53 C54 V72 C88 C92
Annotation score4
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0022900 electron transport chain
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8rb8, PDBe:8rb8, PDBj:8rb8
PDBsum8rb8
PubMed38890433
UniProtC1DMA7

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