Structure of PDB 8oyc Chain B Binding Site BS02

Receptor Information
>8oyc Chain B (length=425) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNPKRIRALKSPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVVFCLT
DEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDY
NAGTLVTDFSPLRIKNQWIEKVISISIPFFEVDAHNVVPCWEASQKHEYA
AHTFRPKLYALLPEFLEEFPELEPNSVTPENKDPLFEPWHFEPGEKAAKK
VMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVEKAE
SNPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSWAKESLNAHRND
VRSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYMRMYWAKKILEWS
ESPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHDRAWGEREVTGK
IRYMSYEGCKRKFDVKLYIEKYSAL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8oyc Time-resolved crystallography captures light-driven DNA repair
Resolution2.5 Å
Binding residue
(original residue number in PDB)		K155 Y158 W328 R429 W431 K439 R450
Binding residue
(residue number reindexed from 1)		K146 Y149 W289 R390 W392 K400 R411
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oyc, PDBe:8oyc, PDBj:8oyc
PDBsum8oyc
PubMed38033070
UniProtQ8PYK9

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