Structure of PDB 8kbf Chain B Binding Site BS02

Receptor Information
>8kbf Chain B (length=129) Species: 1491 (Clostridium botulinum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HHHHPMKELSTIQKREKLNTVERIGSEGPGGAYHEYVIKSNSMDSQGNYD
VYETIKFQKGARKEEKSQHGVIDSDLLEIVRDRLKSFQAGPFSSRENACA
LTHVEEALMWMNRRVEDRIERNVLGTNTK
Ligand information
Ligand IDOJC
InChIInChI=1S/C15H21N5O13P2/c16-12-7-13(18-3-17-12)20(4-19-7)14-10(23)11-6(30-14)2-29-35(26,27)33-34(24,25)28-1-5-8(21)9(22)15(31-5)32-11/h3-6,8-11,14-15,21-23H,1-2H2,(H,24,25)(H,26,27)(H2,16,17,18)/t5-,6-,8-,9-,10-,11-,14-,15+/m1/s1
InChIKeyNDSLKXAJVDJCEG-ZQSHOCFMSA-N
SMILES
SoftwareSMILES
CACTVS 3.385Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH](O[CH]4[CH]3O)[CH](O)[CH]5O
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(OP(=O)(OC[C@@H]5[C@H]([C@H]([C@@H](O5)O4)O)O)O)O)O)N
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OP(=O)(OCC5C(C(C(O5)O4)O)O)O)O)O)N
ACDLabs 12.01Nc1ncnc2c1ncn2C1OC2COP(=O)(O)OP(=O)(O)OCC3OC(OC2C1O)C(O)C3O
CACTVS 3.385Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@@H](O[C@H]4[C@H]3O)[C@H](O)[C@@H]5O
FormulaC15 H21 N5 O13 P2
Name(2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione
ChEMBL
DrugBank
ZINC
PDB chain8kbf Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8kbf Structure of CbTad1 complexed with 1',3'-cADPR and cA3
Resolution2.31 Å
Binding residue
(original residue number in PDB)
F82 F87 N92
Binding residue
(residue number reindexed from 1)
F87 F92 N97
Annotation score1
External links
PDB RCSB:8kbf, PDBe:8kbf, PDBj:8kbf
PDBsum8kbf
PubMed
UniProtP0DW58|TAD1_CLOBO Thoeris anti-defense 1 (Gene Name=tad1)

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