Structure of PDB 8idq Chain B Binding Site BS02

Receptor Information
>8idq Chain B (length=444) Species: 128442 (Talaromyces pinophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WSYSQTLSANIQVNALQRYQEMIGGGCSGAFGWACQQFPGLTPENQEEVT
KILFDENIGGLSIVRNDIGSSPGSTILPTCPATPAGPFNYQWDGSDSCQF
NLTKTALKYNPELYVYANAWSAPGCMKTVGTENDGGQICGVRGTNCTYDW
RQAYADYLVQYVKFYQAEGIDISLLGAWNEPDFNPVTYESMESDGFQAKD
FLEILYPTVKKAFPNLDVSCCDATGARQERNILYEVQQAGGEHFFDVATW
HNYQSSPERPFNVVGKPNIMTEWADGSGPWNTTWDVSGQLAEGLQWALYM
HNAFTNSDTSGYNHWWCAGGGADNVLISITGNSYEVSSRLWAFASYFRFA
RPGSVRIGATSSVENVYVSAYENKNGTVSIPVINAAHFPYEVTIDLQGLK
ARKRVSTFLTDNSHNVTLMDQSELHGSVLKATVPPRAVQVFWLE
Ligand information
Ligand IDMAN
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-PQMKYFCFSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-mannopyranose;
alpha-D-mannose;
D-mannose;
mannose
ChEMBLCHEMBL365590
DrugBank
ZINCZINC000003860903
PDB chain8idq Chain H Residue 7 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8idq Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		R366 L436
Binding residue
(residue number reindexed from 1)		R348 L418
Annotation score5
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004348 glucosylceramidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0006665 sphingolipid metabolic process
GO:0045493 xylan catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8idq, PDBe:8idq, PDBj:8idq
PDBsum8idq
PubMed37144255
UniProtA0A0B8MZ29

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