Structure of PDB 8hzy Chain B Binding Site BS02
Receptor Information
>8hzy Chain B (length=458) Species:
9606
(Homo sapiens) [
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APAERCAHPGADLGAAVHAVGQTLAAGGLVPPDEAGTTARHLVRLAVRYG
NSPFTPLEEARHDLGVDRDAFRRLLALFGQVPELRTAVETGPAGAYWKNT
LLPLEQRGVFDAALARKPVFPYSVGLYPGPTCMFRCHFCVRVTGARYDPS
ALDAGNAMFRSVIDEIPAGNPSAMYFSGGLEPLTNPGLGSLAAHATDHGL
RPTVYTNSFALTERTLERQPGLWGLHAIRTSLYGLNDEEYEQTTGKKAAF
RRVRENLRRFQQLRAERESPINLGFAYIVLPGRASRLLDLVDFIADLNDA
GQGRTIDFVNIRERAELQEALNAFEERVRERTPGLHIDYGYALNSLRTGA
LRIKPATMRPTAHPQVAVQVDLLGDVYLYREAGFPDLDGATRYIAGRVTP
DTSLTEVVRDFVERGGEVAAVDGDEYFMDGFDQVVTARLNQLERDAADGW
EEARGFLR
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
8hzy Chain B Residue 502 [
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Receptor-Ligand Complex Structure
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PDB
8hzy
Mechanistic Insights from the Crystal Structure and Computational Analysis of the Radical SAM Deaminase DesII.
Resolution
2.03979 Å
Binding residue
(original residue number in PDB)
C141 F143 C145 C148 R150 L189 Y242
Binding residue
(residue number reindexed from 1)
C132 F134 C136 C139 R141 L180 Y233
Annotation score
1
External links
PDB
RCSB:8hzy
,
PDBe:8hzy
,
PDBj:8hzy
PDBsum
8hzy
PubMed
38943270
UniProt
Q9ZGH1
|DESII_STRVZ dTDP-4-amino-4,6-dideoxy-D-glucose ammonia-lyase (Gene Name=desII)
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